 Overview
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| This page contains publications
from Professor Jin Hyung Lee's
Lab. |
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Publications |
2012
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| [Journal Publications] |
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Simon Kimm, Tatum Tarin, Jin Hyung Lee, Bob Hu, Kristin Jensen, Dwight Nishimura, James Brooks, Methods for Registration of Magnetic Resonance Images of Ex Vivo Prostate Specimens with Histology, J Magn Reson Imaging, 2012. |
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Jin Hyung Lee, Informing Brain Connectivity with Optogenetic Functional Magnetic Resonance Imaging, Neuroimage, 2012. |
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Zhongnan Fang, Jin Hyung Lee, Brain Circuit Analysis with Real-Time Optogenetic Functional Magnetic Resonance Imaging (rt-ofMRI), will be shown in Proceedings of the ISMRM 20th Annual Meeting, Melbourne, Australia. |
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Nguyen Van Le, Thanh Hai Nguyen, Xiaoyi Yu, Zhongnan Fang, and Jin Hyung Lee, Compressed Sensing Enabled Ultra-High Resolution Optogenetic Functional Magnetic Resonance Imaging (ofMRI), will be shown in Proceedings of the ISMRM 20th Annual Meeting, Melbourne, Australia. |
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2011
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Jin Hyung Lee, Tracing Activity across the Whole Brain Neural Network with Optogenetic Functional Magnetic
Resonance Imaging (ofMRI), Mapping the connectome: Multi-level analysis of brain connectivity Special
Issue, Frontiers in Neuroinformatics, Oct. 2011. doi: 10.3389/fninf.2011.00021.  |
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| [ Conference Proceedings ] |
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Jin Hyung Lee, Jinchao Li, Vasiliy Karasev, Compressed sensing enabled ultra-high resolution optogenetic functional magnetic resonance imaging (ofMRI), In: Neuroscience 2011, Washington DC, 2437. |
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Zhongnan Fang, Jin Hyung Lee, Real-time optogenetic functional magnetic resonance imaging (rt-ofMRI) using graphic processing unit (GPU) based parallel computation, In: Neuroscience 2011, Washington DC, 11405. |
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| [Book Chapter] |
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Jin Hyung Lee, Optogenetic fMRI in Book titled Understanding Biophotonics: Fundamentals,
Advances and Applications (Other Contributing Authors for the Book: Luke Lee, UC Berkeley, Bahram Jalali,
UCLA, Robert Huber, Ludwig-Maximilians-UniversitÃd’t Munich, Eric Potma, UC Irvine, Shuo Tang, Univ.
British Columbia), Pan Stanford Publishing, Expected Publication Date: 2011. |
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2010
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Jin Hyung Lee, Remy Durand, Viviana Gradinaru, Feng Zhang, Inbal Goshen, Dae-Shik Kim, Charu Ramakrishnan, Lief E. Fenno and Karl Deisseroth, Lee et al. reply, Nature, 2010:468: E4-E5. |
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Jin Hyung Lee†*, Remy Durand†, Viviana Gradinaru, Feng Zhang, Inbal Goshen, Dae-Shik Kim, Charu Ramakrishnan, Lief E. Fenno and Karl Deisseroth* , Global and local BOLD signals triggered by neurons defined using genetic and connective identity, Nature, 2010:465(10):788-792. |
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Jin Hyung Lee, Balanced steady state free precession fMRI, International Journal of Imaging Systems and Technology, 2010:20(1):23-30. |
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Jin Hyung Lee, Remy Durand, Viviana Gradinaru, Feng Zhang, Dae-Shik Kim, Karl Deisseroth, Optogenetic fMRI: Local and global fMRI signals driven by neurons with specified type and wiring, In: Neuroscience 2010, San Diego, 9758. |
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Jin Hyung Lee, Remy Durand, Viviana Gradinaru, Feng Zhang, Dae-Shik Kim, Karl Deisseroth, Brain Circuit Mapping with Optogenetic Functional Magnetic Resonance Imaging (ofMRI), In: Proceedings of the 16th Annual Meeting of the Organization for Human Brain Mapping, Barcelona, Spain, p. 728 WTh-PM, 2010. |
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Jin Hyung Lee, Remy Durand, Viviana Gradinaru, Feng Zhang, Dae-Shik Kim, Karl Deisseroth, Optogenetic Functional Magnetic Resonance Imaging (ofMRI): Genetically Targeted In Vivo Brain Circuit Mapping, In:Proceedings of the ISMRM 18th Annual Meeting, Stockholem, p.704. |
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2009
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Jin Hyung Lee, Sarah Sherlock, Masahiro Terashima, Hisanori Kosuge, Yoriyasu Suzuki, Andrew Goodwin, Joshua Robinson, Won-Seok Seo, Zhuang Liu, Richard Luong, Michael V. McConnell, Dwight G. Nishimura, and Hongjie Dai, High-Contrast In-Vivo Visualization of Micro-Vessels using Novel FeCo/GC Magnetic Nanocrystals, Magnetic Resonance in Medicine, 2009:62(6):1497 - 509. |
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Tolga Cukur, Jin Hyung Lee, Brian Hargreaves, Dwight G. Nishimura, Non-Contrast-Enhanced Flow-Independent Peripheral MR Angiography with Balanced SSFP, Magnetic Resonance in Medicine, 2009:61(6):1533-9. |
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Hochong Wu, Jin Hyung Lee, Dwight G. Nishimura, Fat/Water Separation Using a Concentric Rings Trajectory, Magnetic Resonance in Medicine, 2009: 61(3):639-49. |
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| [ Conference Proceedings ] |
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Simon Y. Kimm, Jin Hyung Lee, Dwight G. Nishimura, Tatum V. Tarin, Bob S. Hu, Kristen Jensen, James D. Brook, MR-histology Correlation in Ex-vivo Human Prostate Specimens, In:Proceedings of the ISMRM 17th Annual Meeting, Honolulu, p. 2241. |
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Holden H. Wu, Jin Hyung Lee, Dwight G. Nishimura, Fast-Spin-Echo Imaging and Fat/Water Separation Using a Concentric Rings Trajectory, In:Proceedings of the ISMRM 17th Annual Meeting, Honolulu, p. 2645. |
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Holden H. Wu, Jin Hyung Lee, MR Spectroscopic Imaging Using a Concentric Rings Trajectory, Dwight G. Nishimura, In:Proceedings of the ISMRM 17th Annual Meeting, Honolulu, p. 2628. |
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Holden H. Wu, Jin Hyung Lee, and Dwight G. Nishimura, 3D Magnetization-Prepared Imaging and Fat/Water Separation Using a Stack-of-Rings Trajectory, In:Proceedings of the ISMRM 17th Annual Meeting, Honolulu, p. 2647. |
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Emine U. Saritas, Ajit Shankaranarayanan, Eric T. Han, Joelle K. Barral, Jin Hyung Lee, and Dwight G. Nishimura, High-Resolution DWI outside the CNS using Reduced-FOV Single-Shot EPI, In:Proceedings of the ISMRM 17th Annual Meeting, Honolulu, p. 166. |
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Emine U. Saritas, K-P. Hwang, Eric T. Han, Jin Hyung Lee, Dwight G. Nishimura, and A. Shankaranarayanan, Comparison of Reduced-FOV Single-Shot EPI Methods for DWI: ZOOM-EPI vs. 2D Echo-Planar RF Excitation, In:Proceedings of the ISMRM 17th Annual Meeting, Honolulu, p. 1379. |
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Jin Hyung Lee, Gary Glover, Dwight G. Nishimura, John M. Pauly, Mark Schira, Bridging the gaps: High-Resolution Visual Field Mapping using Passband b-SSFP fMRI, In:Proceedings of the ISMRM 17th Annual Meeting, Honolulu, p.1552. |
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2008
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| [ Journal Publications ] |
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Emine Saritas, Charles Cunningham, Jin Hyung Lee, Eric Han and Dwight G. Nishimura, DWI of the Spinal Cord with Reduced FOV Single-Shot EPI, Magnetic Resonance in Medicine, 2008: 60(2): 468-473. |
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Jin Hyung Lee, Serge O. Dumoulin, Emine U. Saritas, Gary H. Glover, Dwight G. Nishimura, John M. Pauly, Full-Brain Coverage and High-Resolution Imaging Capabilities of Passband b-SSFP fMRI at 3T, Magnetic Resonance in Medicine, 2008: 59(5):1099-110. |
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Ha Young Lee, Sang-Hoon Lee, Chenjie Xu, Jin Xie, Jin Hyung Lee, Bing Wu, Ai Leen Koh, Xiaoying Wang, Robert Sinclair, Shan XWang, Dwight G Nishimura, Sandip Biswal1, Shouheng Sun, Sun Hang Cho and Xiaoyuan Chen, Synthesis and characterization of PVP-coated large core iron oxide nanoparticles as an MRI contrast agent, Nanotechnology, 2008:19: 165101- 15106. |
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Hochong Wu, Jin Hyung Lee and Dwight G. Nishimura, MRI Using A Concentric Rings Trajectory, Magnetic Resonance in Medicine, 2008:59:1:102-112. |
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Jin Hyung Lee, Serge O. Dumoulin, Gary Glover, Brain Wandell, Dwight G. Nishimura, John M. Pauly, Distortion-Free High Resolution Functional MRI for Neurosciences Using Passband Balanced-SSFP at 3T, In: Proceedings of the 14th Annual Meeting of the Organization for Human Brain Mapping, Melbourne, Australia, p.323. |
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Jin Hyung Lee, Gary H. Glover, Taeksoo Kim, Dwight G. Nishimura, Hemodynamic Properties of Passband b-SSFP fMRI, John M. Pauly, In: Proceedings of the ISMRM 16th Annual Meeting, Toronto, 2008. p.3565. |
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Taeksoo Kim, Jongho Lee,Jin Hyung Lee, Gary H. Glover, John M. Pauly, Considerations on Scan Parameters in Passband SSFP FMR, In: Proceedings of the ISMRM 16th Annual Meeting, Toronto, 2008. p.3566. |
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Jin Hyung Lee, Sarah Sherlock, Masahiro Terashima, Hisanori Kosuge, Won-Seok Seo, Yoriyasu Suzuki, Michael V. McConnell, Dwight G. Nishimura, Hongjie Dai, In-Vivo Ultra-High Resolution Imaging of Small Vessels using Improved Sensitivity and Long Circulation time of FeCo-Graphitic Carbon Shell Nanocrystals, In: Proceedings of the ISMRM 16th Annual Meeting, Toronto, 2008. p.3208. |
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Hochong Wu, Jin Hyung Lee, Dwight G. Nishimura, Fat/Water Separation Using a Concentric Rings Trajectory, In: Proceedings of the ISMRM 16th Annual Meeting, Toronto, 2008. p.649. |
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Emine Saritas, Charles Cunningham, Jin Hyung Lee, Dwight G. Nishimura, High-Resolution Axial DWI of Spinal Cord with Reduced-FOV Single-Shot EPI, In: Proceedings of the ISMRM 16th Annual Meeting, Toronto, 2008. p.760. |
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Emine Saritas, Jin Hyung Lee, Dwight G. Nishimura, Effects of T2-Weighting on Optimum b-Value vs. SNR for ADC Measurements, In: Proceedings of the ISMRM 16th Annual Meeting, Toronto, 2008. p.1798. |
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Hisanori Kosuge, Masahiro Terashima, Sarah Sherlock, Jin Hyung Lee, Hongjie Dai, Michael V. McConnell, Characterization of graphite/metal core-shell nanocrystals as multi-modality contrast agents for macrophage and atherosclerosis imaging, In: Proceedings of the ISMRM 16th Annual Meeting, Toronto, 2008. p.1695. |
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Jin Hyung Lee, Masahiro Terashima, Won Seok Seo, Hisanori Kosuge, Sarah Sherlock, Michael V. McConnell, Dwight G. Nishimura, Hongjie Dai, Visualization of Micro-Vasculature using FeCo-Core/Graphitic-Carbon-Shell Nanocrystals and High-Resolution 3D Spiral Imaging, Journal of Cardiovascular Magnetic Resonance, Society for Cardiovascular Magnetic Resonance, 2008. p.2119. |
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Hisanori Kosuge, Masahiro Terashima, Sarah Sherlock, Jin Hyung Lee, Hongjie Dai, Michael V. McConnell, Graphite/Metal core-shell nanocrystals as MRI contrast agents to detect vascular inflammation, Journal of Cardiovascular Magnetic Resonance, Society for Cardiovascular Magnetic Resonance, 2008. p.2105. |
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| [ Book Chapters] |
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Jongho Lee, Taek S. Kim, Jin Hyung Lee and Karla L. Miller, Research Topics in Brain Mapping, p.57-85. |
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2007
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| [ Conference Proceedings ] |
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Jin Hyung Lee, Won-Seok Seo, Masahiro Terashima, Yoriyasu Suzuki, Phillip Yang, Michael V. McConnell, Dwight G. Nishimura, Hongjie Dai, FeCo/Graphitic Carbon-Shell Nanocrystals as MRI Contrast Agents for Cellular and Vascular Imaging, In: Proceedings of the ISMRM 15th Annual Meeting, Berlin, 2007. p.858. |
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Jin Hyung Lee, Serge O. Dumoulin, Gary H. Glover, Brian A. Wandell, Dwight G. Nishimura, John M. Pauly, Full-Brain Coverage and High-Resolution Imaging Capabilities of Passband SSFP fMRI at 3T, In: Proceedings of the ISMRM 15th Annual Meeting, Berlin, 2007. p.694. |
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Emine Saritas, Jin Hyung Lee, Dwight G. Nishimiura, Optimum b-Value vs. SNR for Apparent Diffusion Coefficient Measurements, In: Proceedings of the ISMRM 15th Annual Meeting, Berlin, 2007. p.1508. |
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Hochong Wu, Jin Hyung Lee, Dwight G. Nishimura, Magnetization-Prepared Imaging Using a Concentric Rings Trajectory, In: Proceedings of the ISMRM 15th Annual Meeting, Berlin, 2007. p.414. |
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Tolga Cukur , Jin Hyung Lee , Neal Kepler Bangerter , Brian Andrew Hargreaves , Dwight George Nishimura, Comparison of Phase-Sensitive and Alternating Repetition Time SSFP for Flow-Independent Peripheral Angiography, In: Proceedings of the ISMRM 15th Annual Meeting, Berlin, 2007. p.178. |
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2006
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Won-Seok Seo, Jin Hyung Lee, Yoriyasu Suzuki, Xiaoming Sun, David Mann, Zhuang Liu, Philip Yang, Dwight G. Nishimura and Hongjie Dai, Multifunctional FeCo-Graphitic Shell Magnetic Nanocrystals with Near-Infrared Properties for Nanobiotechnology, Nature Materials, 2006:5:971-976. |
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Jin Hyung Lee, Paul T. Gurney, Rohan Dharmakumar, Graham A. Wright, Brian A. Hargreaves, Ajit Shankaranarayanan, Karla L. Miller, Dwight G. Nishimura, John M. Pauly, Blood Oxygenation (BOX) Level Dependent Functional Brain Imaging using Steady-State Free Precession, In: Proceedings of the ISMRM 14th Annual Meeting, Seatle, 2006. p.3291. |
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Jin Hyung Lee, Paul T. Gurney, Serge O. Dumoulin, Brian A. Wandell, Ajit Shankaranarayanan, Dwight G. Nishimura, John M. Pauly, BOX fMRI using Multiple-Acquisition Steady-State Free Precession Imaging for Full-Brain Coverage, In: Proceedings of the ISMRM 14th Annual Meeting, Seatle, 2006. p.3297. |
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Jin Hyung Lee, Charles H. Cunningham, Brian A. Hargreaves, Logi Vidarsson, Dwight G. Nishimura, John M. Pauly, Bruce L. Daniel, High Resolution Bilateral Dynamic Contrast Enhancement Breast Imaging, In: Proceedings of the ISMRM 14th Annual Meeting, Seatle, 2006. p.2871. |
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Hochong H. Wu, Jin Hyung Lee, Dwight G. Nishimura, MRI Using a Concentric Rings Trajectory with Built-in Off-resonance Correction, In: Proceedings of the ISMRM 14th Annual Meeting, Seatle, 2006. p.341. |
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Juan M. Santos, Bob S. Hu, Jin Hyung Lee, John M. Pauly, Single Breath-Hold Whole-Heart MRA Using Variable Density Spirals and Localized Coil Demodulation, In: Proceedings of the ISMRM 14th Annual Meeting, Seatle, 2006. p.2449. |
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Emine U. Saritas, Charles H. Cunningham, Jin Hyung Lee, Dwight G. Nishimura, DWI of the Spinal Cord with Limited FOV Single-Shot EPI, In: Proceedings of the ISMRM 14th Annual Meeting, Seatle, 2006. p.3466. |
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B.A. Hargreaves, C.H. Cunningham, M. Han, J.M. Pauly, J. H. Lee and B.L. Daniel. New Aspects on Pulse Sequence Design for Breast MRI. Eur. Radiol. 16 [Suppl 5]: E35-E37, September 2006. |
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2005
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| [ Journal Publications ] |
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Jin Hyung Lee, Greig Scott, John M. Pauly and Dwight G. Nishimura, Broadband Multi-Coil Imaging using Multiple Demodulation Hardware: A Feasibility Study, Magnetic Resonance in Medicine, 2005:54:669-676. |
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Michael Lustig, Jin Hyung Lee, David L. Donoho, John M. Pauly, Faster Imaging with Randomly Perturbed, Undersampled Spirals and L1 Reconstruction, In: Proceedings of the ISMRM 13th Annual Meeting, Miami, 2005. p.685. |
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Jongho Lee, Jin Hyung Lee, Brian A. Hargreaves, Karla Miller, John M. Pauly, High Resolution 3D Spiral Trajectory BOSS fMRI, In: Proceedings of the ISMRM 13th Annual Meeting, Miami, 2005. p.120. |
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2004
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Jin Hyung Lee, Neal K. Bangerter, Chuck Cunningham, Julie DiCarlo, Bob S. Hu, Dwight G. Nishimura, 3D High Resolution Imaging, In: Proceedings of the ISMRM 12th Annual Meeting, Kyoto, 2004. p 2094. |
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2003
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2002
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Curtis Coulam, Jin H. Lee, Kristin L. Wedding, Daniel L. Spielman, Nobert J. Pelc, Stephen T. Kee, Bradly B. Hill, Donna M. Bouley, Geraldine C. Derby, Bryan D. Meyers, Anne M. Sawyer-Glover and F. Grahm Sommer. Use of MRI for Noninvasive Measurement of Extraction Fraction and Single Kidney Glomerular Filtration Rate in Swine with Surgically Created Renal Artery Stenosis, Radiology 2002;223:76-82. |
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